| publication_uri | type | publication_title | year | doi | pmid | journal_uri |
| http://vivo.scripps.edu/individual/e1n181649 | AcademicArticle | Modified MuDPIT separation identified 4488 proteins in a system-wide analysis of quiescence in yeast | 2013 | 10.1021/pr400027m | 23540446 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/e4n249238 | AcademicArticle | Identification of long-lived proteins reveals exceptional stability of essential cellular structures | 2013 | 10.1016/j.cell.2013.07.037 | 23993091 | http://vivo.scripps.edu/individual/endnote126238 |
| http://vivo.scripps.edu/individual/enote33461 | AcademicArticle | Digestion and depletion of abundant proteins improves proteomic coverage | 2013 | 10.1038/nmeth.2250 | 23160281 | http://vivo.scripps.edu/individual/endnote37557 |
| http://vivo.scripps.edu/individual/e11n71480 | AcademicArticle | Dynamics of subcellular proteomes during brain development | 2012 | 10.1021/pr201176v | 22397461 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/e1n69168 | AcademicArticle | Single-step inline hydroxyapatite enrichment facilitates identification and quantitation of phosphopeptides from mass-limited proteomes with MudPIT | 2012 | 10.1021/pr300200x | 22509746 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/enote43887 | AcademicArticle | Characterization of breast cancer interstitial fluids by TmT labeling, LTQ-Orbitrap Velos mass spectrometry, and pathway analysis | 2012 | 10.1021/pr2012347 | 22563702 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/enote334116 | AcademicArticle | Proteomic analysis of wild-type and mutant huntingtin-associated proteins in mouse brains identifies unique interactions and involvement in protein synthesis | 2012 | 10.1074/jbc.M112.359307 | 22556411 | http://vivo.scripps.edu/individual/endnote308813 |
| http://vivo.scripps.edu/individual/endnote348372 | AcademicArticle | Differential proteomic analysis of mammalian tissues using SILAM | 2011 | 10.1371/journal.pone.0016039 | 21283754 | http://vivo.scripps.edu/individual/endnote150335 |
| http://vivo.scripps.edu/individual/e9n26167 | AcademicArticle | Census for proteome quantification | 2010 | 10.1002/0471250953.bi1312s29 | 20205189 | http://vivo.scripps.edu/individual/e9n316109 |
| http://vivo.scripps.edu/individual/endnote333503 | AcademicArticle | Role of PI3K on the regulation of BMP2-induced beta-Catenin activation in human bone marrow stem cells | 2010 | 10.1016/j.bone.2010.02.013 | 20167300 | http://vivo.scripps.edu/individual/endnote116445 |
| http://vivo.scripps.edu/individual/endnote266683 | AcademicArticle | Quantitative proteomics approach for identifying protein-drug interactions in complex mixtures using protein stability measurements | 2010 | 10.1073/pnas.1000148107 | 20439767 | http://vivo.scripps.edu/individual/endnote71945 |
| http://vivo.scripps.edu/individual/e7n266160 | AcademicArticle | A computational approach to correct arginine-to-proline conversion in quantitative proteomics | 2009 | 10.1038/nmeth0309-184 | 19247291 | http://vivo.scripps.edu/individual/endnote37557 |
| http://vivo.scripps.edu/individual/e9n338191 | AcademicArticle | Shotgun protein identification and quantification by mass spectrometry | 2009 | 10.1007/978-1-60761-157-8_15 | 19544028 | http://vivo.scripps.edu/individual/enote13799 |
| http://vivo.scripps.edu/individual/e9n279475 | AcademicArticle | Shotgun protein identification and quantification by mass spectrometry in neuroproteomics | 2009 | 10.1007/978-1-59745-562-6_16 | 20058176 | http://vivo.scripps.edu/individual/enote13799 |
| http://vivo.scripps.edu/individual/endnote83047 | AcademicArticle | Preliminary quantitative profile of differential protein expression between rat L6 myoblasts and myotubes by stable isotope labeling with amino acids in cell culture | 2009 | 10.1002/pmic.200800354 | 19253283 | http://vivo.scripps.edu/individual/endnote59898 |
| http://vivo.scripps.edu/individual/endnote330730 | AcademicArticle | 'Two-stage double-technique hybrid (TSDTH)' identification strategy for the analysis of BMP2-induced transdifferentiation of premyoblast C2C12 cells to osteoblast | 2009 | 10.1021/pr900231a | 19655815 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/endnote262367 | AcademicArticle | Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis | 2008 | 10.1021/pr0705441 | 18220336 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/endnote254463 | AcademicArticle | The proteomes of human parotid and submandibular/sublingual gland salivas collected as the ductal secretions | 2008 | 10.1021/pr700764j | 18361515 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/endnote142483 | AcademicArticle | Large-scale differential proteome analysis in Plasmodium falciparum under drug treatment | 2008 | 10.1371/journal.pone.0004098 | 19116658 | http://vivo.scripps.edu/individual/endnote150335 |
| http://vivo.scripps.edu/individual/endnote246352 | AcademicArticle | Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression Saccharomyces cerevisiae strains: the comparison of two quantitative methods | 2008 | 10.1021/pr700580m | 18173223 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/endnote243601 | AcademicArticle | A quantitative analysis software tool for mass spectrometry-based proteomics | 2008 | 10.1038/nmeth.1195 | 18345006 | http://vivo.scripps.edu/individual/endnote37557 |
| http://vivo.scripps.edu/individual/endnote142070 | AcademicArticle | Quantitative analysis of brain nuclear phosphoproteins identifies developmentally regulated phosphorylation events | 2008 | 10.1021/pr8003198 | 18823140 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/endnote161348 | AcademicArticle | Motif-specific sampling of phosphoproteomes | 2008 | 10.1021/pr800147u | 18452278 | http://vivo.scripps.edu/individual/endnote350246 |
| http://vivo.scripps.edu/individual/endnote138117 | AcademicArticle | Comparisons of mass spectrometry compatible surfactants for global analysis of the mammalian brain proteome | 2008 | 10.1021/ac800606w | 18937422 | http://vivo.scripps.edu/individual/endnote220455 |
| http://vivo.scripps.edu/individual/endnote62855 | AcademicArticle | Quantitative proteomic analysis of primary neurons reveals diverse changes in synaptic protein content in fmr1 knockout mice | 2008 | 10.1073/pnas.0804678105 | 18829439 | http://vivo.scripps.edu/individual/endnote71945 |
| http://vivo.scripps.edu/individual/endnote126520 | AcademicArticle | Relative quantification of stable isotope labeled peptides using a linear ion trap-Orbitrap hybrid mass spectrometer | 2007 | 10.1021/ac062054i | 17367114 | http://vivo.scripps.edu/individual/endnote220455 |
| http://vivo.scripps.edu/individual/endnote164671 | AcademicArticle | Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development | 2007 | 10.1101/gr.6375007 | 17675365 | http://vivo.scripps.edu/individual/endnote180353 |
| http://vivo.scripps.edu/individual/endnote63403 | AcademicArticle | Automatic validation of phosphopeptide identifications from tandem mass spectra | 2007 | 10.1021/ac061334v | 17297928 | http://vivo.scripps.edu/individual/endnote220455 |
| http://vivo.scripps.edu/individual/endnote171626 | AcademicArticle | Quantitative mass spectrometry identifies insulin signaling targets in C. elegans | 2007 | 10.1126/science.1139952 | 17673661 | http://vivo.scripps.edu/individual/endnote276633 |
| http://vivo.scripps.edu/individual/endnote296127 | AcademicArticle | Optimizing TiO2-based phosphopeptide enrichment for automated multidimensional liquid chromatography coupled to tandem mass spectrometry | 2007 | 10.1021/ac0618730 | 17523591 | http://vivo.scripps.edu/individual/endnote220455 |
| http://vivo.scripps.edu/individual/endnote190015 | AcademicArticle | Central limit theorem as an approximation for intensity-based scoring function | 2006 | 10.1021/ac051206r | 16383314 | http://vivo.scripps.edu/individual/endnote220455 |
| http://vivo.scripps.edu/individual/endnote259006 | AcademicArticle | Nelumbinis semen reverse's a decrease in 5-ht1a receptor binding induced by chronic mild stress, a depression-like symptom | 2004 | 10.1007/bf02975433 | 15554266 | http://vivo.scripps.edu/individual/endnote205659 |
