subject area of
- 'Two-stage double-technique hybrid (TSDTH)' identification strategy for the analysis of BMP2-induced transdifferentiation of premyoblast C2C12 cells to osteoblast Academic Article
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- A global metabolite profiling approach to identify protein-metabolite interactions Academic Article
- A method for the comprehensive proteomic analysis of membrane proteins Academic Article
- A model for random sampling and estimation of relative protein abundance in shotgun proteomics Academic Article
- A peptidomics strategy to elucidate the proteolytic pathways that inactivate peptide hormones Academic Article
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- A phosphoproteomic analysis of the ErbB2 receptor tyrosine kinase signaling pathways Academic Article
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- A proteomic signature of dormancy in the actinobacterium Micrococcus luteus Academic Article
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- Activity-based probes for functional proteomics Academic Article
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- Activity-based protein profiling: From enzyme chemistry to proteomic chemistry Academic Article
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- An isotopically tagged azobenzene-based cleavable linker for quantitative proteomics Academic Article
- An orthogonal active site identification system (OASIS) for proteomic profiling of natural product Academic Article
- Analysis of URI nuclear interaction with RPB5 and components of the R2TP/prefoldin-like complex Academic Article
- Analysis of organelles by on-line two-dimensional liquid chromatography-tandem mass spectrometry Academic Article
- Analysis of the Shewanella oneidensis proteome by two-dimensional gel electrophoresis under nondenaturing conditions Academic Article
- Analysis of the proteolysis of bioactive peptides using a peptidomics approach Academic Article
- Analytical platforms for activity-based protein profiling - exploiting the versatility of chemistry for functional proteomics Academic Article
- Analyzing marginal cases in differential shotgun proteomics Academic Article
- Anion and cation mixed-bed ion exchange for enhanced multidimensional separations of peptides and phosphopeptides Academic Article
- Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast Academic Article
- Application of activity-based protein profiling to study enzyme function in adipocytes Academic Article
- Application of capture-recapture models to estimation of protein count in MudPIT experiments Academic Article
- Application of mass spectrometry to study proteomics and interactomics in cystic fibrosis Academic Article
- Applied systems biology and malaria Academic Article
- Applying genomics to organ transplantation medicine in both discovery and validation of biomarkers Academic Article
- Aptamer-based multiplexed proteomic technology for biomarker discovery Academic Article
- Aptamers and the RNA world, past and present Academic Article
- Assessment of the red cell proteome of young patients with unexplained hemolytic anemia by two-dimensional differential in-gel electrophoresis (dige) Academic Article
- Assignment of protein function in the postgenomic era Academic Article
- Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra Academic Article
- Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples Academic Article
- Automatic annotation of matrix-assisted laser desorption/ionization n-glycan spectra Academic Article
- BDNF induces widespread changes in synaptic protein content and up-regulates components of the translation machinery: an analysis using high-throughput proteomics Academic Article
- Behavioral and proteomic analysis of stress response in zebrafish (Danio rerio) Academic Article
- Biomarkers for early and late stage chronic allograft nephropathy by proteogenomic profiling of peripheral blood Academic Article
- Breast cancer cell lines grown in vivo: What goes in isn't always the same as what comes out Academic Article
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- CEBS object model for systems biology data, SysBio-OM Academic Article
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- Cancer proteomics by quantitative shotgun proteomics Academic Article
- Capillary electrophoresis applied to proteomic analysis Academic Article
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- Cell cycle phosphorylation of mitotic exit network (MEN) proteins Academic Article
- Cell surface proteomics identifies molecules functionally linked to tumor cell intravasation Academic Article
- Census for proteome quantification Academic Article
- Central limit theorem as an approximation for intensity-based scoring function Academic Article
- Cerebrospinal fluid proteomics reveals potential pathogenic changes in the brains of SIV-infected monkeys Academic Article
- Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression Saccharomyces cerevisiae strains: the comparison of two quantitative methods Academic Article
- Characterization of protein serotonylation via bioorthogonal labeling and enrichment Academic Article
- Characterization of proteomic and metabolomic responses to dietary factors and supplements Academic Article
- Characterization of tetrahymena histone h2b variants and posttranslational populations by electron capture dissociation (ecd) fourier transform ion cyclotron mass spectrometry (ft-icr ms) Academic Article
- Characterization of the 26S proteasome network in Plasmodium falciparum Academic Article
- Characterization of the ribosome biogenesis landscape in E. coli using quantitative mass spectrometry Academic Article
- Chemical 'omics' approaches for understanding protein cysteine oxidation in biology Academic Article
- Chemical proteomic platform to identify citrullinated proteins Academic Article
- Chemical proteomic probes for profiling cytochrome P450 activities and drug interactions in vivo Academic Article
- Chemical proteomics with sulfonyl fluoride probes reveals selective labeling of functional tyrosines in glutathione transferases Academic Article
- Chemical reporters for fluorescent detection and identification of O-GlcNAc-modified proteins reveal glycosylation of the ubiquitin ligase NEDD4-1 Academic Article
- Chemical strategies for activity-based proteomics Academic Article
- Chemical strategies for functional proteomics Academic Article
- Chemo-resistant protein expression pattern of glioblastoma cells (A172) to perillyl alcohol Academic Article
- Chemoproteomic discovery of AADACL1 as a regulator of human platelet activation Academic Article
- Chemoproteomic discovery of cysteine-containing human short open reading frames Academic Article
- Chemoproteomic evaluation of target engagement by the cyclin-dependent kinase 4 and 6 inhibitor palbociclib correlates with cancer cell response Academic Article
- Chemoproteomic profiling identifies changes in DNA-PK as markers of early dengue virus infection Academic Article
- Chemoproteomic profiling of host and pathogen enzymes active in cholera Academic Article
- Chemoproteomic screening of covalent ligands reveals UBA5 as a novel pancreatic cancer target Academic Article
- Chemoproteomics-enabled discovery of a potent and selective inhibitor of the DNA repair protein MGMT Academic Article
- Chemoselective probes for metabolite enrichment and profiling Academic Article
- Chromatographic benefits of elevated temperature for the proteomic analysis of membrane proteins Academic Article
- Chromosome-Based Proteomic Study for Identifying Novel Protein Variants from Human Hippocampal Tissue Using Customized neXtProt and GENCODE Databases Academic Article
- Citrullination regulates pluripotency and histone H1 binding to chromatin Academic Article
- Click chemistry-facilitated comprehensive identification of proteins adducted by antimicrobial 5-nitroimidazoles for discovery of alternative drug targets against giardiasis Academic Article
- Clinical and plasma proteomic markers correlating with chronic kidney disease after liver transplantation Academic Article
- Combined integrin phosphoproteomic analyses and small interfering RNA-based functional screening identify key regulators for cancer cell adhesion and migration Academic Article
- Comparative analysis of cleavable azobenzene-based affinity tags for bioorthogonal chemical proteomics Academic Article
- Comparative assessment of large-scale proteomic studies of apoptotic proteolysis Academic Article
- Comparative proteome analysis using amine-reactive isobaric tagging reagents coupled with 2D LC/MS/MS in 3T3-L1 adipocytes following hypoxia or normoxia Academic Article
- Comparative proteomic analysis of the aging soleus and extensor digitorum longus rat muscles using TMT labeling and mass spectrometry Academic Article
- Comparative proteomic analysis of the insulin-induced L6 myotube secretome Academic Article
- Comparative proteomics reveals a diagnostic signature for pulmonary head-and-neck cancermetastasis Academic Article
- Comparison of protein expression ratios observed by sixplex and duplex TMT labeling method Academic Article
- Complete protein characterization using top-down mass spectrometry and ultraviolet photodissociation Academic Article
- Composition and structure of the 80S ribosome from the green alga Chlamydomonas reinhardtii: 80S ribosomes are conserved in plants and animals Academic Article
- Contemporary, yeast-based approaches to understanding human genetic variation Academic Article
- Coregulator interactions with the thyroid hormone receptor Academic Article
- Curation of the mammalian palmitoylome indicates a pivotal role for palmitoylation in diseases and disorders of the nervous system and cancers Academic Article
- Cvak104 is a novel poly-l-lysine-stimulated kinase that targets the beta 2-subunit of ap2 Academic Article
- Cysteine-specific chemical proteomics: from target identification to drug discovery Academic Article
- DTASelect and contrast: tools for assembling and comparing protein identifications from shotgun proteomics Academic Article
- DYn-2 based identification of Arabidopsis sulfenomes Academic Article
- Determining the protein repertoire of Cryptosporidium parvum sporozoites Academic Article
- Development of trifunctional probes for glycoproteomic analysis Academic Article
- Differential protein expression in the metal-reducing bacterium Geobacter sulfurreducens strain PCA grown with fumarate or ferric citrate Academic Article
- Differential proteomic analysis of mammalian tissues using SILAM Academic Article
- Differential recovery of peptides from sample tubes and the reproducibility of quantitative proteomic data Academic Article
- Digestion and depletion of abundant proteins improves proteomic coverage Academic Article
- Direct detection of biotinylated proteins by mass spectrometry Academic Article
- Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture Academic Article
- Discovering disease-associated enzymes by proteome reactivity profiling Academic Article
- Discovering potent and selective reversible inhibitors of enzymes in complex proteomes Academic Article
- Discovery of a potent, selective, and efficacious class of reversible alpha-ketoheterocycle inhibitors of fatty acid amide hydrolase effective as analgesics Academic Article
- Discovery of an exceptionally potent and selective class of fatty acid amide hydrolase inhibitors enlisting proteome-wide selectivity screening: concurrent optimization of enzyme inhibitor potency and selectivity Academic Article
- Disparate proteome reactivity profiles of carbon electrophiles Academic Article
- Dissection of the mammalian midbody proteome reveals conserved cytokinesis mechanisms Academic Article
- Distinct protein classes including novel merozoite surface antigens in Raft-like membranes of Plasmodium falciparum Academic Article
- Dynamic proteomic overview of glioblastoma cells (A172) exposed to perillyl alcohol Academic Article
- Dynamics of subcellular proteomes during brain development Academic Article
- ERdj3 Is an endoplasmic reticulum degradation factor for mutant glucocerebrosidase variants linked to Gaucher's disease Academic Article
- Ecto-Fc MS identifies ligand-receptor interactions through extracellular domain Fc fusion protein baits and shotgun proteomic analysis Academic Article
- Editorial overview: Omics: The maturation of chemical biology Academic Article
- Emerging Miniaturized Proteomic Technologies to Study Cell Signaling in Clinical Samples Academic Article
- Endothelial targeting of cowpea mosaic virus (CPMV) via surface vimentin Academic Article
- Energy dependence of HCD on peptide fragmentation: stepped collisional energy finds the sweet spot Academic Article
- Enzyme inhibitor discovery by activity-based protein profiling Academic Article
- Evaluation of sulfatase-directed quinone methide traps for proteomics Academic Article
- Expanding the dipeptidyl peptidase 4-regulated peptidome via an optimized peptidomics platform Academic Article
- Exploring the proteome of Plasmodium Academic Article
- Extent of protein-protein interactions and quasi-equivalence in viral capsids Academic Article
- FKBP10 depletion enhances glucocerebrosidase proteostasis in Gaucher disease fibroblasts Academic Article
- False-positive rate determination of protein target discovery using a covalent modification- and mass spectrometry-based proteomics platform Academic Article
- Fluorescent profiling of modular biosynthetic enzymes by complementary metabolic and activity based probes Academic Article
- From SOMAmer-based biomarker discovery to diagnostic and clinical applications: a SOMAmer-based, streamlined multiplex proteomic assay Academic Article
- From raw data to biological discoveries: a computational analysis pipeline for mass spectrometry-based proteomics Academic Article
- Functional analysis of protein targets by metabolomic approaches Academic Article
- Functional genomics, proteomics, and regulatory DNA analysis in isogenic settings using zinc finger nuclease-driven transgenesis into a safe harbor locus in the human genome Academic Article
- Functional interrogation of kinases and other nucleotide-binding proteins Academic Article
- Functional proteogenomics: embracing complexity Academic Article
- Functional proteomic and structural insights into molecular recognition in the nitrilase family enzymes Academic Article
- Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways Academic Article
- Functional specialization of beta-arrestin interactions revealed by proteomic analysis Academic Article
- G protein-coupled receptor endocytosis confers uniformity in responses to chemically distinct ligands Academic Article
- Games with a scientific purpose Academic Article
- GeneDig: a web application for accessing genomic and bioinformatics knowledge Academic Article
- Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome Academic Article
- Genomic studies in stem cell systems Academic Article
- Genomics and proteomics in solving brain complexity Academic Article
- Glial membranes at the node of Ranvier prevent neurite outgrowth Academic Article
- Global aggregation of newly translated proteins in an Escherichia coli strain deficient of the chaperonin GroEL Academic Article
- Global approaches for telling time: omics and the Arabidopsis circadian clock Academic Article
- Global identification of caspase substrates using PROTOMAP (Protein Topography and Migration Analysis Platform) Academic Article
- Global mapping of the topography and magnitude of proteolytic events in apoptosis Academic Article
- Global profiling strategies for mapping dysregulated metabolic pathways in cancer Academic Article
- Global, in situ, site-specific analysis of protein S-sulfenylation Academic Article
- Heat-shock response transcriptional program enables high-yield and high-quality recombinant protein production in Escherichia coli Academic Article
- Hierarchical and multi-resolution representation of protein flexibility Academic Article
- High-resolution functional proteomics by active-site peptide profiling Academic Article
- High-throughput expression and detergent screening of integral membrane proteins Academic Article
- Highly multiplexed proteomic platform for biomarker discovery, diagnostics, and therapeutics Academic Article
- Histone citrullination by protein arginine deiminase: Is arginine methylation a green light or a roadblock? Academic Article
- Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production Academic Article
- Human Proteinpedia enables sharing of human protein data Academic Article
- Identification and characterization of sORF-encoded polypeptides Academic Article
- Identification of GABA(c) receptor protein homeostasis network components from three tandem mass spectrometry proteomics approaches Academic Article
- Identification of Plasmodium falciparum antigens by antigenic analysis of genomic and proteomic data Academic Article
- Identification of a tumor specific, active-site mutation in casein kinase 1α by chemical proteomics Academic Article
- Identification of covalent bromodomain binders through DNA display of small molecules Academic Article
- Identification of evening complex associated proteins in Arabidopsis by affinity purification and mass spectrometry Academic Article
- Identification of microprotein-protein interactions via APEX tagging Academic Article
- Identification of mycobacterium tuberculosis h37rv integral membrane proteins by one-dimensional gel electrophoresis and liquid chromatography electrospray ionization tandem mass spectrometry Academic Article
- Identification of novel chondroitin proteoglycans in Caenorhabditis elegans: embryonic cell division depends on CPG-1 and CPG-2 Academic Article
- Identification of novel integral membrane proteins of the nuclear envelope with potential disease links using subtractive proteomics Academic Article
- Identification of novel targets for miR-29a using miRNA proteomics Academic Article
- Identification of the low density lipoprotein (ldl) receptor-related protein-1 interactome in central nervous system myelin suggests a role in the clearance of necrotic cell debris Academic Article
- Identification of tumor-associated antigens as diagnostic and predictive biomarkers in cancer Academic Article
- Identifying components of protein complexes in C. elegans using co-immunoprecipitation and mass spectrometry Academic Article
- Identifying differences in protein expression levels by spectral counting and feature selection Academic Article
- Impact of ion trap tandem mass spectra variability on the identification of peptides Academic Article
- Improvements in proteomic metrics of low abundance proteins through proteome equalization using ProteoMiner prior to MudPIT Academic Article
- Improving protein identification sensitivity by combining MS and MS/MS information for shotgun proteomics using LTQ-Orbitrap high mass accuracy data Academic Article
- Improving the TFold test for differential shotgun proteomics Academic Article
- Improving the comprehensiveness and sensitivity of sheath less capillary electrophoresis-tandem mass spectrometry for proteomic analysis Academic Article
- In situ trans ligands of CD22 identified by glycan-protein photocross-linking-enabled proteomics Academic Article
- In vivo brain GPCR signaling elucidated by phosphoproteomics Academic Article
- In vivo modification of native carrier protein domains Academic Article
- In vivo quantitative proteomics of somatosensory cortical synapses shows which protein levels are modulated by sensory deprivation Academic Article
- In vivo tagging and characterization of S-glutathionylated proteins by a chemoenzymatic method Academic Article
- In-cell selectivity profiling of serine protease inhibitors by activity-based proteomics Academic Article
- In-line separation by capillary electrophoresis prior to analysis by top-down mass spectrometry enables sensitive characterization of protein complexes Academic Article
- Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0 Academic Article
- Integrated phenotypic and activity-based profiling links Ces3 to obesity and diabetes Academic Article
- Integrated proteomic analysis of major isoaspartyl-containing proteins in the urine of wild type and protein L-isoaspartate O-methyltransferase-deficient mice Academic Article
- Integration of cardiac proteome biology and medicine by a specialized knowledgebase Academic Article
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- Interference-free proteome quantification with MS/MS-based isobaric isotopologue detection Academic Article
- International research networks in viral structural proteomics: Again, lessons from sars Academic Article
- Introduction to section II: omics in the biology of cystic fibrosis Academic Article
- Investigating endogenous peptides and peptidases using peptidomics Academic Article
- Investigative proteomics: identification of an unknown plant virus from infected plants using mass spectrometry Academic Article
- Isobaric labeling-based relative quantification in shotgun proteomics Academic Article
- Isolation of focal adhesion proteins for biochemical and proteomic analysis Academic Article
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- LDL receptor-related protein 1 regulates the abundance of diverse cell-signaling proteins in the plasma membrane proteome Academic Article
- Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis Academic Article
- Large scale protein profiling by combination of protein fractionation and multidimensional protein identification technology (MudPIT) Academic Article
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- Large-scale identification of c-MYC-associated proteins using a combined TAP/MudPIT approach Academic Article
- Large-scale profiling of protein palmitoylation in mammalian cells Academic Article
- Large-scale protein identification using mass spectrometry Academic Article
- Large-scate database searching using tandem mass spectra: looking up the answer in the back of the book Academic Article
- Letter to the editor: NMR structure determination of the hypothetical protein TM1290 from Thermotoga maritima using automated NOESY analysis Academic Article
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- Mass spectral analysis in proteomics Academic Article
- Mass spectrometry accelerates membrane protein analysis Academic Article
- Mass spectrometry as an emerging tool for systems biology Academic Article
- Mass spectrometry for proteomics Academic Article
- Mass spectrometry in high-throughput proteomics: ready for the big time Academic Article
- Mass spectrometry reveals specific and global molecular transformations during viral infection Academic Article
- Mass spectrometry-based neuropeptidomics of secretory vesicles from human adrenal medullary pheochromocytoma reveals novel peptide products of prohormone processing Academic Article
- Measuring the dynamics of E. coli ribosome biogenesis using pulse-labeling and quantitative mass spectrometry Academic Article
- Mechanism of carbamate inactivation of FAAH: Implications for the design of covalent inhibitors and in vivo functional probes for enzymes Academic Article
- Mechanism-based post-translational modification and inactivation in terpene synthases Academic Article
- Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis Academic Article
- Methods for the elucidation of protein-small molecule interactions Academic Article
- MicroRNA regulation of molecular networks mapped by global microRNA, mRNA, and protein expression in activated T lymphocytes Academic Article
- Microbial metalloproteomes are largely uncharacterized Academic Article
- Mitotic spindle proteomics in Chinese hamster ovary cells Academic Article
- Mixed-element capture agents: A simple strategy for the construction of synthetic, high-affinity protein capture ligands Academic Article
- Modified MuDPIT separation identified 4488 proteins in a system-wide analysis of quiescence in yeast Academic Article
- Molecular architecture of the human pre-mRNA 3' processing complex Academic Article
- Molecular mechanisms of chronic kidney transplant rejection via large-scale proteogenomic analysis of tissue biopsies Academic Article
- Molecular stages of rapid and uniform neuralization of human embryonic stem cells Academic Article
- Motif-specific sampling of phosphoproteomes Academic Article
- Multidimensional lc separations in shotgun proteomics Academic Article
- Multiplexed immunoassay: quantitation and profiling of serum biomarkers using magnetic nanoprobes and MALDI-TOF MS Academic Article
- NMR studies of structure and function of biological macromolecules (Nobel lecture) Academic Article
- Nanodiscs and SILAC-based mass spectrometry to identify a membrane protein interactome Academic Article
- Nanoprobe-based immobilized metal affinity chromatography for sensitive and complementary enrichment of multiply phosphorylated peptides Academic Article
- Ndrg2 is a PGC-1α/ERRα target gene that controls protein synthesis and expression of contractile-type genes in C2C12 myotubes Academic Article
- Neural palmitoyl-proteomics reveals dynamic synaptic palmitoylation Academic Article
- Neuropeptidomic components generated by proteomic functions in secretory vesicles for cell-cell communication Academic Article
- New approach to capture and characterize synaptic proteome Academic Article
- New insights into the role of Plg-RKT in macrophage recruitment Academic Article
- Nmr structure determination of the conserved hypothetical protein tm1816 from thermotoga maritima Academic Article
- Novel biology and druggable targets via chemoproteomics Academic Article
- Nuclear membrane proteins with potential disease links found by subtractive proteomics Academic Article
- O-GlcNAc transferase/host cell factor C1 complex regulates gluconeogenesis by modulating PGC-1α stability Academic Article
- Optimization of activity-based probes for proteomic profiling of histone deacetylase complexes Academic Article
- Optimization of mass spectrometry-compatible surfactants for shotgun proteomics Academic Article
- Organellar proteomics reveals Golgi arginine dimethylation Academic Article
- Overflow metabolism in Escherichia coli results from efficient proteome allocation Academic Article
- PNA-encoded protease substrate microarrays Academic Article
- PSEA-Quant: a protein set enrichment analysis on label-free and label-based protein quantification data Academic Article
- PYR/PYL/RCAR family members are major in vivo ABI1 protein phosphatase 2C-interacting proteins in Arabidopsis Academic Article
- Palmitoylome profiling reveals S-palmitoylation-dependent antiviral activity of IFITM3 Academic Article
- PatternLab for proteomics: a tool for differential shotgun proteomics Academic Article
- PatternLab: from mass spectra to label-free differential shotgun proteomics Academic Article
- PepExplorer: a similarity-driven tool for analyzing de novo sequencing results Academic Article
- Peptidomics approach to elucidate the proteolytic regulation of bioactive peptides Academic Article
- Peptidomics methods for the identification of peptidase-substrate interactions Academic Article
- Peptidomics of prolyl endopeptidase in the central nervous system Academic Article
- Peptidomics of the prolyl peptidases Academic Article
- Performance of a linear ion trap-Orbitrap hybrid for peptide analysis Academic Article
- Phenotypic differences in hiPSC NPCs derived from patients with schizophrenia Academic Article
- Phosphatidylinositol 3,4,5-trisphosphate activity probes for the labeling and proteomic characterization of protein binding partners Academic Article
- Phosphoproteomic analysis of human embryonic stem cells Academic Article
- Phosphoproteomics Academic Article
- Photoaptamer arrays applied to multiplexed proteomic analysis Academic Article
- Physiological and molecular alterations promoted by Schizotetranychus oryzae mite infestation in rice leaves Academic Article
- Pivotal role of computers and software in mass spectrometry - SEQUEST and 20 years of tandem MS database searching Academic Article
- Plasma membrane proteomics of human breast cancer cell lines identifies potential targets for breast cancer diagnosis and treatment Academic Article
- Plasma proteome of severe acute respiratory syndrome analyzed by two-dimensional gel electrophoresis and mass spectrometry Academic Article
- Platelets: Developmental biology, physiology, and translatable platforms for preclinical investigation and drug development Academic Article
- Potent and selective alpha-ketoheterocycle-based inhibitors of the anandamide and oleamide catabolizing enzyme, fatty acid amide hydrolase Academic Article
- Practical 4 '-phosphopantetheine active site discovery from proteomic samples Academic Article
- Prediction of functionally important phospho-regulatory events in xenopus laevis oocytes Academic Article
- Preliminary quantitative profile of differential protein expression between rat L6 myoblasts and myotubes by stable isotope labeling with amino acids in cell culture Academic Article
- Probing the membrane environment of the TOR kinases reveals functional interactions between TORC1, actin, and membrane trafficking in Saccharomyces cerevisiae Academic Article
- Profiling enzyme activities in vivo using click chemistry methods Academic Article
- Profiling phospho-signaling networks in breast cancer using reverse-phase protein arrays Academic Article
- Profiling protein thiol oxidation in tumor cells using sulfenic acid-specific antibodies Academic Article
- Protein S-nitrosylation in Plasmodium falciparum Academic Article
- Protein analysis by shotgun/bottom-up proteomics Academic Article
- Protein identification using 2D-LC-MS/MS Academic Article
- Protein kinase C-eta controls CTLA-4-mediated regulatory T cell function Academic Article
- Protein microarrays and proteomics Academic Article
- Protein production and purification Academic Article
- Protein trafficking and anchoring complexes revealed by proteomic analysis of inward rectifier potassium channel (Kir2.x)-associated proteins Academic Article
- ProteinInferencer: Confident protein identification and multiple experiment comparison for large scale proteomics projects Academic Article
- Proteome-wide mapping of cholesterol-interacting proteins in mammalian cells Academic Article
- Proteomic analysis of fatty-acylated proteins in mammalian cells with chemical reporters reveals S-acylation of histone H3 variants Academic Article
- Proteomic analysis of human immunodeficency virus using liquid chromatography/tandem mass spectrometry effectively distinguishes specific incorporated host proteins Academic Article
- Proteomic analysis of isolated Chlamydomonas centrioles reveals orthologs of ciliary-disease genes Academic Article
- Proteomic analysis of mammalian primary cilia Academic Article
- Proteomic analysis of methamphetamine-induced reinforcement processes within the mesolimbic dopamine system Academic Article
- Proteomic analysis of peptides tagged with dimedone and related probes Academic Article
- Proteomic analysis of plasmodium in the mosquito: progress and pitfalls Academic Article
- Proteomic analysis of polyketide and nonribosomal peptide biosynthesis Academic Article
- Proteomic analysis of the coagulation reaction in plasma and whole blood using protomap Academic Article
- Proteomic analysis of tumor necrosis factor-alpha (TNF-α)-induced L6 myotube secretome reveals novel TNF-α-dependent myokines in diabetic skeletal muscle Academic Article
- Proteomic analysis of wild-type and mutant huntingtin-associated proteins in mouse brains identifies unique interactions and involvement in protein synthesis Academic Article
- Proteomic analysis of zygote and ookinete stages of the avian malaria parasite Plasmodium gallinaceum delineates the homologous proteomes of the lethal human malaria parasite Plasmodium falciparum Academic Article
- Proteomic analysis provides insights on venom processing in Conus textile Academic Article
- Proteomic analysis reveals a role for Bcl2-associated athanogene 3 and major vault protein in resistance to apoptosis in senescent cells by regulating ERK1/2 activation Academic Article
- Proteomic approach to coronary atherosclerosis shows ferritin light chain as a significant marker: Evidence consistent with iron hypothesis in atherosclerosis Academic Article
- Proteomic comparison of four Eimeria tenella life-cycle stages: unsporulated oocyst, sporulated oocyst, sporozoite and second-generation merozoite Academic Article
- Proteomic comparison of two fractions derived from the transsynaptic scaffold Academic Article
- Proteomic identification of Hsc70 as a mediator of RGS9-2 degradation by in vivo interactome analysis Academic Article
- Proteomic identification of palmitoylated proteins Academic Article
- Proteomic profile of Cryptococcus neoformans biofilm reveals changes in metabolic processes Academic Article
- Proteomic profiling of mechanistically distinct enzyme classes using a common chemotype Academic Article
- Proteomic profiling of metalloprotease activities with cocktails of active-site probes Academic Article
- Proteomic profiling of the influence of iron availability on Cryptococcus gattii Academic Article
- Proteomic signature of fatty acid biosynthesis inhibition available for in vivo mechanism-of-action studies Academic Article
- Proteomics analysis of cardiac muscle from rats with peroxisomal proliferator-activated receptor α (PPARα) stimulation Academic Article
- Proteomics analysis unravels the functional repertoire of coronavirus nonstructural protein 3 Academic Article
- Proteomics and pulse azidohomoalanine labeling of newly synthesized proteins: what are the potential applications? Academic Article
- Proteomics approach reveals novel proteins on the surface of malaria-infected erythrocytes Academic Article
- Proteomics by mass spectrometry: approaches, advances, and applications Academic Article
- Proteomics in malaria Academic Article
- Proteomics of Pyrococcus furiosus (Pfu): identification of extracted proteins by three independent methods Academic Article
- Proteomics of dense core secretory vesicles reveal distinct protein categories for secretion of neuroeffectors for cell-cell communication Academic Article
- Proteomics of integral membrane proteins-theory and application Academic Article
- Proteomics of organelles and large cellular structures Academic Article
- Proteomics opens doors to the mechanisms of developmentally regulated secretion Academic Article
- Proteomics-based discovery of a novel, structurally unique, and developmentally regulated plasminogen receptor, Plg-RKT, a major regulator of cell surface plasminogen activation Academic Article
- Proteomics: where's Waldo in yeast? Academic Article
- Pseudopodium-enriched atypical kinase 1 regulates the cytoskeleton and cancer progession Academic Article
- Pulsed azidohomoalanine labeling in mammals (PALM) detects changes in liver-specific LKB1 knockout mice Academic Article
- Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development Academic Article
- Quantifying protein-protein interactions in high throughput using protein domain microarrays Academic Article
- Quantitative analysis of age specific variation in the abundance of human female parotid salivary proteins Academic Article
- Quantitative analysis of human pluripotency and neural specification by in-depth (phospho) proteomic profiling Academic Article
- Quantitative analysis of isotope distributions in proteomic mass spectrometry using least-squares Fourier transform convolution Academic Article
- Quantitative mass spectrometry identifies insulin signaling targets in C. elegans Academic Article
- Quantitative phosphoproteomic analysis of the tumor necrosis factor pathway Academic Article
- Quantitative phosphoproteomic profiling of PINK1-deficient cells identifies phosphorylation changes in nuclear proteins Academic Article
- Quantitative plasma proteomic profiling identifies the vitamin E binding protein afamin as a potential pathogenic factor in SIV induced CNS disease Academic Article
- Quantitative proteomic analysis identifies targets and pathways of a 2-aminobenzamide HDAC inhibitor in Friedreich's ataxia patient iPSC-derived neural stem cells Academic Article
- Quantitative proteomic analysis of primary neurons reveals diverse changes in synaptic protein content in fmr1 knockout mice Academic Article
- Quantitative proteomic analysis reveals a simple strategy of global resource allocation in bacteria Academic Article
- Quantitative proteomic approach for cellulose degradation by Neurospora crassa Academic Article
- Quantitative proteomic profiling reveals differentially regulated proteins in cystic fibrosis cells Academic Article
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- Quantitative proteomics approach for identifying protein-drug interactions in complex mixtures using protein stability measurements Academic Article
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- Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles) Academic Article
- Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles) Academic Article
- Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: The Amsterdam Principles Academic Article
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- Regulation of myoblast differentiation by the nuclear envelope protein NET39 Academic Article
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- Reproducibility of quantitative proteomic analyses of complex biological mixtures by multidimensional protein identification technology Academic Article
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- Scanning the human genome with combinatorial transcription factor libraries Academic Article
- Scientific frontiers: emerging technologies for salivary diagnostics Academic Article
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- Secreted IGFBP5 mediates mTORC1-dependent feedback inhibition of IGF-1 signalling Academic Article
- Secretome of the biocontrol agent Metarhizium anisopliae induced by the cuticle of the cotton pest Dysdercus peruvianus reveals new insights into infection Academic Article
- Selective inhibition of plant serine hydrolases by agrochemicals revealed by competitive ABPP Academic Article
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- Sheathless capillary electrophoresis-tandem mass spectrometry for top-down characterization of Pyrococcus furiosus proteins on a proteome scale Academic Article
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- Shotgun protein identification and quantification by mass spectrometry in neuroproteomics Academic Article
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- Shotgun proteomics: integrating technologies to answer biological questions Academic Article
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- Site-specific proteomic mapping identifies selectively modified regulatory cysteine residues in functionally distinct protein networks Academic Article
- Small, but mighty? Searching for human microproteins and their potential for understanding health and disease Academic Article
- Sod2-deficiency anemia: Protein oxidation and altered protein expression reveal targets of damage, stress response, and antioxidant responsiveness Academic Article
- Species specificity in major urinary proteins by parallel evolution Academic Article
- Sperm chromatin proteomics identifies evolutionarily conserved fertility factors Academic Article
- Stable isotope labeling of mammals (SILAM) for in vivo quantitative proteomic analysis Academic Article
- Steady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor Academic Article
- Strategies for shotgun identification of integral membrane proteins by tandem mass spectrometry Academic Article
- Strategies for shotgun identification of post-translational modifications by mass spectrometry Academic Article
- Streptococcus mutans protein synthesis during mixed-species biofilm development by high-throughput quantitative proteomics Academic Article
- Stress-independent activation of XBP1s and/or ATF6 reveals three functionally diverse ER proteostasis environments Academic Article
- Structure and function of fatty acid amide hydrolase Academic Article
- Substrate mimicry in an activity-based probe that targets the nitrilase family of enzymes Academic Article
- Substrate screening identifies a novel target sequence for the proteasomal activity regulated by ionizing radiation Academic Article
- Synergistic computational and experimental proteomics approaches for more accurate detection of active serine hydrolases in yeast Academic Article
- Systems biology of circadian rhythms: an outlook Academic Article
- T cell receptor (TCR)-induced tyrosine phosphorylation dynamics identifies THEMIS as a new TCR signalosome component Academic Article
- Tailored glycoproteomics and glycan site mapping using saccharide-selective bioorthogonal probes Academic Article
- Tandem orthogonal proteolysis-activity-based protein profiling (TOP-ABPP) - a general method for mapping sites of probe modification in proteomes Academic Article
- Target identification for a Hedgehog pathway inhibitor reveals the receptor GPR39 Academic Article
- Targeted label-free quantitative analysis of secretory proteins from adipocytes in response to oxidative stress Academic Article
- The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins Academic Article
- The application of mass spectrometry to membrane proteomics Academic Article
- The biological impact of mass-spectrometry-based proteomics Academic Article
- The challenge of protein structure determination - lessons from structural genomics Academic Article
- The expanding landscape of the thiol redox proteome Academic Article
- The functional proteomics toolbox: methods and applications Academic Article
- The future of proteomic analysis in biological systems and molecular medicine Academic Article
- The host-range, genomics and proteomics of Escherichia coli O157:H7 bacteriophage rV5 Academic Article
- The lifespan-promoting effect of acetic acid and reishi polysaccharide Academic Article
- The minimum information about a proteomics experiment (MIAPE) Academic Article
- The nuclear membrane proteome: extending the envelope Academic Article
- The protein architecture of human secretory vesicles reveals differential regulation of signaling molecule secretion by protein kinases Academic Article
- The proteome of Toxoplasma gondii: integration with the genome provides novel insights into gene expression and annotation Academic Article
- The revolution and evolution of shotgun proteomics for large-scale proteome analysis Academic Article
- The tyrosine kinase inhibitor gefitinib restricts mycobacterium tuberculosis growth through increased lysosomal biogenesis and modulation of cytokine signaling Academic Article
- Three distinct condensin complexes control C. elegans chromosome dynamics Academic Article
- Tissue-specific proteome tagging: an orthogonal approach Academic Article
- Top down proteomics Academic Article
- Toward objective evaluation of proteomic algorithms Academic Article
- Transcriptomic and proteomic analyses of a Wolbachia-free filarial parasite provide evidence of trans-kingdom horizontal gene transfer Academic Article
- Trifunctional chemical probes for the consolidated detection and identification of enzyme activities from complex proteomes Academic Article
- Trypanosoma brucei PRMT1 is a nucleic acid binding protein with a role in energy metabolism and the starvation stress response Academic Article
- Using proteomic approach to identify tumor-associated antigens as markers in hepatocellular carcinoma Academic Article
- What general conclusions can we draw from kinase profiling data sets? Academic Article
- XDIA: improving on the label-free data-independent analysis Academic Article
- YADA: a tool for taking the most out of high-resolution spectra Academic Article
- betaCaMKII in lateral habenula mediates core symptoms of depression Academic Article
- ∆F508 CFTR interactome remodelling promotes rescue of cystic fibrosis Academic Article