subject area of
- A Java API for working with PubChem datasets Academic Article
- A bacterial metapopulation adapts locally to phage predation despite global dispersal Academic Article
- A bioinformatic assay for pluripotency in human cells Academic Article
- A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana Academic Article
- A comparison of match-only algorithms for the analysis of plasmodium falciparum oligonucleotide arrays Academic Article
- A comparison of the Celera and Ensembl predicted gene sets reveals little overlap in novel genes Academic Article
- A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses Academic Article
- A computational approach to correct arginine-to-proline conversion in quantitative proteomics Academic Article
- A computational framework for proteome-wide pursuit and prediction of metalloproteins using ICP-MS and MS/MS data Academic Article
- A computationally designed inhibitor of an Epstein-Barr viral Bcl-2 protein induces apoptosis in infected cells Academic Article
- A covering method for detecting genetic associations between rare variants and common phenotypes Academic Article
- A gene wiki for community annotation of gene function Academic Article
- A high-resolution C. elegans essential gene network based on phenotypic profiling of a complex tissue Academic Article
- A new member of the 4-methylideneimidazole-5-one-containing aminomutase family from the enediyne kedarcidin biosynthetic pathway Academic Article
- A new perspective on V3 phenotype prediction Academic Article
- A note on generalized genome scan meta-analysis statistics Academic Article
- A novel computational model of the circadian clock in Arabidopsis that incorporates PRR7 and PRR9 Academic Article
- A novel method for finding tRNA genes Academic Article
- A phosphopantetheinylating polyketide synthase producing a linear polyene to initiate enediyne antitumor antibiotic biosynthesis Academic Article
- A population response analysis approach to assign class II HLA-epitope restrictions Academic Article
- A proteogenomics approach integrating proteomics and ribosome profiling increases the efficiency of protein identification and enables the discovery of alternative translation start sites Academic Article
- A quantitative protein interaction network for the ErbB receptors using protein microarrays Academic Article
- A versatile phenotyping system and analytics platform reveals diverse temporal responses to water availability in setaria Academic Article
- Active site binding modes of curcumin in HIV-1 protease and integrase Academic Article
- Agonist antibody that induces human malignant cells to kill one another Academic Article
- An application and empirical comparison of statistical analysis methods for associating rare variants to a complex phenotype Academic Article
- An archaeal antioxidant: Characterization of a dps-like protein from sulfolobus solfataricus Academic Article
- An ensemble method for gene discovery based on DNA microarray data Academic Article
- An in vivo screen to identify candidate neurogenic genes in the developing Xenopus visual system Academic Article
- An online resource for GPCR structure determination and analysis Academic Article
- Analysis of large-scale sequencing of small RNAs Academic Article
- Analysis of microtubule dynamic instability using a plus-end growth marker Academic Article
- Analysis of stop-gain and frameshift variants in human innate immunity genes Academic Article
- Analyzing molecular interactions Academic Article
- Applications of beta-mixture models in bioinformatics Academic Article
- Applying genomics to organ transplantation medicine in both discovery and validation of biomarkers Academic Article
- Arrayed protein library technology for therapeutic biologic discovery Academic Article
- Assigning function to yeast proteins by integration of technologies Academic Article
- AssociationViewer: a scalable and integrated software tool for visualization of large-scale variation data in genomic context Academic Article
- AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading Academic Article
- Automatic annotation of matrix-assisted laser desorption/ionization n-glycan spectra Academic Article
- Autonomous metabolomics for rapid metabolite identification in global profiling Academic Article
- Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics Academic Article
- Biobanking: an important resource for precision medicine in glioblastoma Academic Article
- Biochemistry. Integrative structural biology Academic Article
- Biodiversity and biogeography of phages in modern stromatolites and thrombolites Academic Article
- Biogps: An extensible and customizable portal for querying and organizing gene annotation resources Academic Article
- Bioinformatic analysis of circadian gene oscillation in mouse aorta Academic Article
- Bioinformatic identification of genes suppressing genome instability Academic Article
- Bioinformatics and HIV latency Academic Article
- Bioinformatics: the next frontier of metabolomics Academic Article
- Biosynthesis of the enediyne antitumor antibiotic c-1027 involves a new branching point in chorismate metabolism Academic Article
- Building and refining protein models within cryo-electron microscopy density maps based on homology modeling and multiscale structure refinement Academic Article
- C-S bond cleavage by a polyketide synthase domain Academic Article
- CAFET algorithm reveals Wnt/PCP signature in lung squamous cell carcinoma Academic Article
- CIRCADIAN CLOCK-ASSOCIATED 1 regulates ROS homeostasis and oxidative stress responses Academic Article
- Can the false-discovery rate be misleading? Academic Article
- Cancer proteomics by quantitative shotgun proteomics Academic Article
- Cell cycle networks link gene expression dysregulation, mutation, and brain maldevelopment in autistic toddlers Academic Article
- Characterization of sporulation histidine kinases of bacillus anthracis Academic Article
- Coarse grain lipid-protein molecular interactions and diffusion with MsbA flippase Academic Article
- Coevolution and subsite decomposition for the design of resistance-evading HIV-1 protease inhibitors Academic Article
- Collecting and organizing systematic sets of protein data Academic Article
- Combining h/d exchange mass spectroscopy and computational docking reveals extended DNA-binding surface on uracil-DNA glycosylase Academic Article
- Combining metabolite-based pharmacophores with Bayesian machine learning models for mycobacterium tuberculosis drug discovery Academic Article
- Composition and structure of the 80S ribosome from the green alga Chlamydomonas reinhardtii: 80S ribosomes are conserved in plants and animals Academic Article
- Computation-guided backbone grafting of a discontinuous motif onto a protein scaffold Academic Article
- Computational coevolution of antiviral drug resistance Academic Article
- Computational correction of copy number effect improves specificity of CRISPR-Cas9 essentiality screens in cancer cells Academic Article
- Computational design of an unnatural amino acid dependent metalloprotein with atomic level accuracy Academic Article
- Computational design of epitope-scaffolds allows induction of antibodies specific for a poorly immunogenic hiv vaccine epitope Academic Article
- Computational design of protein antigens that interact with the CDR H3 loop of HIV broadly neutralizing antibody 2F5 Academic Article
- Computational design of proteins targeting the conserved stem region of influenza hemagglutinin Academic Article
- Computational design of self-assembling register-specific collagen heterotrimers Academic Article
- Computational fragment-based binding site identification by ligand competitive saturation Academic Article
- Computational functional group mapping for drug discovery Academic Article
- Computational reconstruction of multidomain proteins using atomic force microscopy data Academic Article
- Computational tools for epitope vaccine design and evaluation Academic Article
- Crowdsourcing for bioinformatics Academic Article
- Crowdsourcing in biomedicine: challenges and opportunities Academic Article
- Crystal and solution structures of a prokaryotic m16b peptidase: An open and shut case Academic Article
- Crystal structure of an alpha/beta serine hydrolase (YDR428C) from Saccharomyces cerevisiae at 1.85 Å resolution Academic Article
- Crystallization and preliminary X-ray characterization of the nitrile reductase QueF: a queuosine-biosynthesis enzyme Academic Article
- Current advances in molecular, biochemical, and computational modeling analysis of microalgal triacylglycerol biosynthesis Academic Article
- DNA binding-dependent glucocorticoid receptor activity promotes adipogenesis via Kruppel-like factor 15 gene expression Academic Article
- DNA-based photonic logic gates: AND, NAND, and INHIBIT Academic Article
- Deep mutational scanning: assessing protein function on a massive scale Academic Article
- Deep sequencing of protease inhibitor resistant HIV patient isolates reveals patterns of correlated mutations in Gag and protease Academic Article
- Defining the rna internal loops preferred by benzimidazole derivatives via 2D combinatorial screening and computational analysis Academic Article
- Density functional and electrostatics study of oxidized and reduced ribonucleotide reductase: comparisons with methane monooxygenase Academic Article
- Detecting individual sites subject to episodic diversifying selection Academic Article
- Differential gene expression in lps/ifn gamma activated microglia and macrophages: In vitro versus in vivo Academic Article
- Digital orthodoxy of human data collection Academic Article
- Discovering disease-associated enzymes by proteome reactivity profiling Academic Article
- Discovery and functional characterization of a neomorphic PTEN mutation Academic Article
- Discovery of acetylcholinesterase peripheral anionic site ligands through computational refinement of a directed library Academic Article
- Discovery of highly potent, selective, and brain-penetrable leucine-rich repeat kinase 2 (LRRK2) small molecule inhibitors Academic Article
- Discovery of novel drugs for promising targets Academic Article
- Dissection of the mammalian midbody proteome reveals conserved cytokinesis mechanisms Academic Article
- Dizeez: an online game for human gene-disease annotation Academic Article
- Docking molecules by families to increase the diversity of hits in database screens: Computational strategy and experimental evaluation Academic Article
- Dose-response in a high density three-dimensional liver device with real-time bioenergetic and metabolic flux quantification Academic Article
- Druggable protein interaction sites are more predisposed to surface pocket formation than the rest of the protein surface Academic Article
- Dynamics in cryo em reconstructions visualized with maximum-likelihood derived variance maps Academic Article
- Early emergence of negative regulation of the tyrosine kinase Src by the C-terminal Src kinase Academic Article
- Ecto-Fc MS identifies ligand-receptor interactions through extracellular domain Fc fusion protein baits and shotgun proteomic analysis Academic Article
- Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet Academic Article
- Electrostatic aspects of protein-protein interactions Academic Article
- Enabling drug discovery project decisions with integrated computational chemistry and informatics Academic Article
- Engineered DNA sequence syntax inspector Academic Article
- Enhancing the selectivity of kinase inhibitors in oncology: a chemical biology perspective Academic Article
- Enrich: software for analysis of protein function by enrichment and depletion of variants Academic Article
- Enrichment of regulatory signals in conserved non-coding genomic sequence Academic Article
- Envelope: Interactive software for modeling and fitting complex isotope distributions Academic Article
- Epigenetic landscapes reveal transcription factors that regulate CD8+ T cell differentiation Academic Article
- Eugene: a domain specific language for specifying and constraining synthetic biological parts, devices, and systems Academic Article
- Evidence-based annotation of the malaria parasite's genome using comparative expression profiling Academic Article
- Evolution of the TIR, tolls and TLRs: functional inferences from computational biology Academic Article
- Evolutionary analysis of HIV-1 protease inhibitors: methods for design of inhibitors that evade resistance Academic Article
- Expanding the proteome: Disordered and alternatively folded proteins Academic Article
- Extent of protein-protein interactions and quasi-equivalence in viral capsids Academic Article
- Factor Xa active site substrate specificity with substrate phage display and computational molecular modeling Academic Article
- Fast, cheap and out of control: a zero curation model for ontology development Academic Article
- FoldEco: A model for proteostasis in E. coli Academic Article
- FoldGPCR: Structure prediction protocol for the transmembrane domain of G protein-coupled receptors from class A Academic Article
- Function and dynamics of macromolecular complexes explored by integrative structural and computational biology Academic Article
- Functional metagenomic profiling of nine biomes Academic Article
- GeneDig: a web application for accessing genomic and bioinformatics knowledge Academic Article
- Genome-wide association of bipolar disorder suggests an enrichment of replicable associations in regions near genes Academic Article
- Genomic studies of transcription factor-DNA interactions Academic Article
- Genomic-scale comparison of sequence- and structure-based methods of function prediction: Does structure provide additional insight? Academic Article
- Glioma-propagating cells as an in vitro screening platform: PLK1 as a case study Academic Article
- Glycomics: An integrated systems approach to structure-function relationships of glycans Academic Article
- GuavaH: a compendium of host genomic data in HIV biology and disease Academic Article
- Ha novel approach to investigate tissue-specific trinucleotide repeat instability Academic Article
- Hi-Fi transmission of periodic signals amid cell-to-cell variability Academic Article
- Hierarchical and multi-resolution representation of protein flexibility Academic Article
- Hierarchical and programmable one-pot synthesis of oligosaccharides Academic Article
- High confidence fission yeast SUMO conjugates identified by tandem denaturing affinity purification Academic Article
- High-throughput assays for promiscuous inhibitors Academic Article
- Hotspot-centric de novo design of protein binders Academic Article
- Human germline antibody gene segments encode polyspecific antibodies Academic Article
- IDEPI: rapid prediction of HIV-1 antibody epitopes and other phenotypic features from sequence data using a flexible machine learning platform Academic Article
- IHOPerator: user-scripting a personalized bioinformatics Web, starting with the iHOP website Academic Article
- Identification and cross-species comparison of canine osteoarthritic gene regulatory cis-elements Academic Article
- Identification of an HIV-1 clade A envelope that exhibits broad antigenicity and neutralization sensitivity and elicits antibodies targeting three distinct epitopes Academic Article
- Identification of direct residue contacts in protein-protein interaction by message passing Academic Article
- Identification of rare cancer driver mutations by network reconstruction Academic Article
- Identification of small molecular weight inhibitors of Src homology 2 domain-containing tyrosine phosphatase 2 (SHP-2) via in silico database screening combined with experimental assay Academic Article
- Identification of the thiazolyl peptide GE37468 gene cluster from Streptomyces ATCC 55365 and heterologous expression in Streptomyces lividans Academic Article
- Improving the TFold test for differential shotgun proteomics Academic Article
- In silico activity profiling reveals the mechanism of action of antimalarials discovered in a high-throughput screen Academic Article
- In silico discovery of transcription regulatory elements in plasmodium falciparum Academic Article
- In silico qtl mapping of basal liver iron levels in inbred mouse strains Academic Article
- Increased hydrophobicity at the n terminus/membrane interface impairs gating of the severe combined immunodeficiency-related orai1 mutant Academic Article
- Informatics and multiplexing of intact protein identification in bacteria and the archaea Academic Article
- Informatics enhanced SNP microarray analysis of 30 miscarriage samples compared to routine cytogenetics Academic Article
- Informatics-based, highly accurate, noninvasive prenatal paternity testing Academic Article
- Integrated computational and experimental analysis of the neuroendocrine transcriptome in genetic hypertension identifies novel control points for the cardiometabolic syndrome Academic Article
- Integrating computation and visualization for biomolecular analysis: an example using Python and AVS Academic Article
- Interaction fidelity in two-component signaling Academic Article
- Interdependency of brassinosteroid and auxin signaling in Arabidopsis Academic Article
- Interoperability with Moby 1.0: it's better than sharing your toothbrush Academic Article
- Ionomics and the study of the plant ionome Academic Article
- Kinomics-structural biology and chemogenomics of kinase inhibitors and targets Academic Article
- Large-scale integration of human genetic and physical maps Academic Article
- Leveraging two-way prob-level block design for identifying differential gene expression with high-density oligonucleotide arrays Academic Article
- Local quality assessment in homology models using statistical potentials and support vector machines Academic Article
- Low-molecular-weight protein tyrosine phosphatases of bacillus subtilis Academic Article
- Machine learning models and pathway genome data base for trypanosoma cruzi drug discovery Academic Article
- Measurement of protein unfolding/refolding kinetics and structural characterization of hidden intermediates by NMR relaxation dispersion Academic Article
- Meta- and orthogonal integration of influenza "OMICs'' data defines a role for UBR4 in virus budding Academic Article
- Meta-analysis of untargeted metabolomic data from multiple profiling experiments Academic Article
- Metagenomic analysis of lysogeny in Tampa Bay: implications for prophage gene expression Academic Article
- Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals Academic Article
- Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity Academic Article
- MicroRNA regulation of molecular networks mapped by global microRNA, mRNA, and protein expression in activated T lymphocytes Academic Article
- Microtask crowdsourcing for disease mention annotation in PubMed abstracts Academic Article
- Minimum information about a biosynthetic gene cluster Academic Article
- Mining the Giardia genome and proteome for conserved and unique basal body proteins Academic Article
- Mining the antibodyome for HIV-1-neutralizing antibodies with next-generation sequencing and phylogenetic pairing of heavy/light chains Academic Article
- Mobile elements create structural variation: Analysis of a complete human genome Academic Article
- Model of the alpha L beta 2 integrin I-domain/ICAM-1 DI interface suggests that subtle changes in loop orientation determine ligand specificity Academic Article
- Multiscale coarse-graining of the protein energy landscape Academic Article
- Networks link antigenic and receptor-binding sites of influenza hemagglutinin: Mechanistic insight into fitter strain propagation Academic Article
- Nmr structure determination of the conserved hypothetical protein tm1816 from thermotoga maritima Academic Article
- Non-invasive prenatal detection of trisomy 13 using a single nucleotide polymorphism- and informatics-based approach Academic Article
- OncoRep: an n-of-1 reporting tool to support genome-guided treatment for breast cancer patients using RNA-sequencing Academic Article
- Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing Academic Article
- Orphan receptor GPR158 is an allosteric modulator of RGS7 catalytic activity with an essential role in dictating its expression and localization in the brain Academic Article
- Outcome of the first wwPDB Hybrid/Integrative Methods Task Force Workshop Academic Article
- PDZ domain binding selectivity is optimized across the mouse proteome Academic Article
- PSEA-Quant: a protein set enrichment analysis on label-free and label-based protein quantification data Academic Article
- Parallel identification of new genes in Saccharomyces cerevisiae Academic Article
- Perspective on computational and structural aspects of kinase discovery from IPK2014 Academic Article
- Phase-locked signals elucidate circuit architecture of an oscillatory pathway Academic Article
- Platensimycin and platencin biosynthesis in Streptomyces platensis, showcasing discovery and characterization of novel bacterial diterpene synthases Academic Article
- Predicting PDZ domain-peptide interactions from primary sequences Academic Article
- Predicting structurally conserved contacts for homologous proteins using sequence conservation filters Academic Article
- Proliferating cell nuclear antigen loaded onto double-stranded DNA: Dynamics, minor groove interactions and functional implications Academic Article
- Protein analysis by shotgun/bottom-up proteomics Academic Article
- Protein identification using 2D-LC-MS/MS Academic Article
- Protein interaction mapping for target validation: The need for an integrated combinatory process involving complementary approaches Academic Article
- Protein-protein docking with F(2)Dock 2.0 and GB-rerank Academic Article
- Proteomic analysis of tumor necrosis factor-alpha (TNF-α)-induced L6 myotube secretome reveals novel TNF-α-dependent myokines in diabetic skeletal muscle Academic Article
- Proteomics by mass spectrometry: approaches, advances, and applications Academic Article
- Pseudopodium-enriched atypical kinase 1 regulates the cytoskeleton and cancer progession Academic Article
- Purdue ionomics information management system. An integrated functional genomics platform Academic Article
- Putting proteins in context Academic Article
- Quantitative analysis of brain nuclear phosphoproteins identifies developmentally regulated phosphorylation events Academic Article
- Quantitative analysis of human pluripotency and neural specification by in-depth (phospho) proteomic profiling Academic Article
- RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis Academic Article
- Recognition templates for predicting adenylate-binding sites in proteins Academic Article
- Regulatory networks define phenotypic classes of human stem cell lines Academic Article
- Release of 50 new, drug-like compounds and their computational target predictions for open source anti-tubercular drug discovery Academic Article
- Rhesus macaque B-cell responses to an HIV-1 trimer vaccine revealed by unbiased longitudinal repertoire analysis Academic Article
- Rigid body refinement of protein complexes with long-range distance restraints from pulsed dipolar ESR Academic Article
- Rosetta predictions in casp5: Successes, failures, and prospects for complete automation Academic Article
- Rosettaremodel: A generalized framework for flexible backbone protein design Academic Article
- SG-ADVISER CNV: copy-number variant annotation and interpretation Academic Article
- Scripps Genome ADVISER: annotation and distributed variant interpretation SERver Academic Article
- Selectivity by small-molecule inhibitors of protein interactions can be driven by protein surface fluctuations Academic Article
- Semen-specific genetic characteristics of human immunodeficiency virus type 1 env Academic Article
- Sequence and structure signatures of cancer mutation hotspots in protein kinases Academic Article
- Sequence interpretation. Functional annotation of mouse genome sequences Academic Article
- Shape complementarity of protein-protein complexes at multiple resolutions Academic Article
- Signaling between chloroplasts and the nucleus: can a systems biology approach bring clarity to a complex and highly regulated pathway? Academic Article
- Social tagging in the life sciences: characterizing a new metadata resource for bioinformatics Academic Article
- Software tools for macromolecular microscopy Academic Article
- Solution structures of the putative anti-σ-factor antagonist TM1442 from Thermotoga maritima in the free and phosphorylated states Academic Article
- Solution x-ray scattering combined with computational modeling reveals multiple conformations of covalently bound ubiquitin on pcna Academic Article
- Statistical coupling analysis-guided library design for the discovery of mutant luciferases Academic Article
- Structural analysis of mammalian cytochrome P450 2B4 covalently bound to the mechanism-based inactivator tert-butylphenylacetylene: insight into partial enzymatic activity Academic Article
- Structural biology: form and function instructions Academic Article
- Structural disorder in expanding the functionome of aminoacyl-tRNA synthetases Academic Article
- Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation Academic Article
- Structure of concatenated HAMP domains provides a mechanism for signal transduction Academic Article
- Structures of virus and virus-like particles Academic Article
- Symptom-driven idiopathic disease gene identification Academic Article
- Synergistic computational and experimental proteomics approaches for more accurate detection of active serine hydrolases in yeast Academic Article
- Synergy of NMR, computation, and x-ray crystallography for structural biology Academic Article
- TagDock: an efficient rigid body docking algorithm for oligomeric protein complex model construction and experiment planning Academic Article
- Targeted chromatin profiling reveals novel enhancers in Ig H and Ig L chain loci Academic Article
- The 2.5 Å structure of CD1c in complex with a mycobacterial lipid reveals an open groove ideally suited for diverse antigen presentation Academic Article
- The Chlamydomonas genome reveals the evolution of key animal and plant functions Academic Article
- The Geropathology Research Network: An interdisciplinary approach for integrating pathology into research on aging Academic Article
- The Life Sciences Semantic Web is full of creeps! Academic Article
- The NS5A protein of hepatitis C virus is a zinc metalloprotein Academic Article
- The challenge of protein structure determination - lessons from structural genomics Academic Article
- The crystal structure of BlmI as a model for nonribosomal peptide synthetase peptidyl carrier proteins Academic Article
- The crystal structure of avian cd1 reveals a smaller, more primordial antigen-binding pocket compared to mammalian cd1 Academic Article
- The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins Academic Article
- The fragile breakage versus random breakage models of chromosome evolution Academic Article
- The gene wiki: Community intelligence applied to human gene annotation Academic Article
- The implicitome: a resource for rationalizing gene-disease associations Academic Article
- The mammalian Doublesex homolog DMRT6 coordinates the transition between mitotic and meiotic developmental programs during spermatogenesis Academic Article
- The origin of enantioselectivity in aldolase antibodies: crystal structure, site-directed mutagenesis, and computational analysis Academic Article
- The origins of asymmetry in the folding transition states of protein L and protein G Academic Article
- The predicted binding site and dynamics of peptide inhibitors to the Methuselah GPCR from Drosophila melanogaster Academic Article
- The proteome of mouse brain microvessel membranes and basal lamina Academic Article
- The sequence of the human genome Academic Article
- The third acgg-db meeting report: Towards an international collaborative infrastructure for glycobioinformatics Academic Article
- The transcription factor encyclopedia Academic Article
- The wisdom of the commons: Ensemble tree classifiers for prostate cancer prognosis Academic Article
- Therapeutic targeting of casein kinase 1δ in breast cancer Academic Article
- Three-dimensional structural view of the central metabolic network of Thermotoga maritima Academic Article
- Total synthesis and biological investigation of (-)-promysalin Academic Article
- Towards precise classification of cancers based on robust gene functional expression profiles Academic Article
- Transcriptional profiling identifies the signaling axes of IGF and transforming growth factor-β as involved in the pathogenesis of osteosarcoma Academic Article
- Unifying model for molecular determinants of the preselection Vβ repertoire Academic Article
- Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse Academic Article
- Using AutoDock for ligand-receptor docking Academic Article
- Variant interpretation: functional assays to the rescue Academic Article
- Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes Academic Article
- Windex: A toolset for indexing helices Academic Article
- XCMS2: Processing tandem mass spectrometry data for metabolite identification and structural characterization Academic Article
- YADA: a tool for taking the most out of high-resolution spectra Academic Article
- ZiF-Predict: a web tool for predicting DNA-binding specificity in C2H2 zinc finger proteins Academic Article
- Zinc-independent folate biosynthesis: genetic, biochemical, and structural investigations reveal new metal dependence for GTP cyclohydrolase IB Academic Article
- cellPACK: a virtual mesoscope to model and visualize structural systems biology Academic Article
- ePMV embeds molecular modeling into professional animation software environments Academic Article
- plusTipTracker: Quantitative image analysis software for the measurement of microtubule dynamics Academic Article
- uPy: a ubiquitous CG Python API with biological-modeling applications Academic Article