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Ligands in psi structures

Academic Article
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Overview

authors

  • Kumar, A.
  • Chiu, H. J.
  • Axelrod, H. L.
  • Morse, A.
  • Elsliger, M. A.
  • Wilson, Ian
  • Deacon, A.

publication date

  • October 2010

journal

  • Acta Crystallographica Section F-Structural Biology and Crystallization Communications  Journal

abstract

  • Approximately 65% of PSI structures report some type of ligand(s) that is bound in the crystal structure. Here, a description is given of how such ligands are handled and analyzed at the JCSG and a survey of the types, variety and frequency of ligands that are observed in the PSI structures is also compiled and analyzed, including illustrations of how these bound ligands have provided functional clues for annotation of proteins with little or no previous experimental characterization. Furthermore, a web server was developed as a tool to mine and analyze the PSI structures for bound ligands and other identifying features.

subject areas

  • Crystallography, X-Ray
  • Databases, Genetic
  • Internet
  • Ligands
  • Models, Molecular
  • Protein Conformation
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Identity

PubMed Central ID

  • PMC2954221

International Standard Serial Number (ISSN)

  • 1744-3091

Digital Object Identifier (DOI)

  • 10.1107/s1744309110008092

PubMed ID

  • 20944227
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Additional Document Info

start page

  • 1309

end page

  • 1316

volume

  • 66

issue

  • Pt 10

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