recent publications
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academic article
- Deacon, D. C., Happe, C. L., Chen, C., Tedeschi, N., Manso, A. M., Li, T., Dalton, N. D., Peng, Q., Farah, E. N., Gu, Y., Tenerelli, K. P., Tran, V. D., et al. Combinatorial interactions of genetic variants in human cardiomyopathy Nature Biomedical Engineering 2019 3:147-157 DOI:10.1038/s41551-019-0348-9
- Fan, X., Wang, H., Sun, L., Zheng, X., Yin, X., Zuo, X., Peng, Q., Standish, K. A., Cheng, H., Zhang, Y., Wang, Z., Xiao, F., et al. Fine mapping and subphenotyping implicates ADRA1B gene variants in psoriasis susceptibility in a Chinese population Epigenomics 2019 11:455-467 DOI:10.2217/epi-2018-0131 PMID:30785334
- Peng, Q., Bizon, C., Gizer, I. R., Wilhelmsen, K. C., Ehlers, C. L. Genetic loci for alcohol-related life events and substance-induced affective symptoms: indexing the "dark side" of addiction Translational Psychiatry 2019 9 DOI:10.1038/s41398-019-0397-6 PMID:30718457 PMCID:PMC6362044
- Peng, Q., Gizer, I. R., Wilhelmsen, K. C., Ehlers, C. L. Associations between genomic variants in alcohol dehydrogenase genes and alcohol symptomatology in American Indians and European Americans: distinctions and convergence Alcoholism-Clinical and Experimental Research 2017 41:1695-1704 DOI:10.1111/acer.13480 PMID:28815635 PMCID:PMC5626638
- Peng, Q., Schork, N. J., Wilhelmsen, K. C., Ehlers, C. L. Whole genome sequence association and ancestry-informed polygenic profile of EEG alpha in a Native American population American Journal of Medical Genetics Part B-Neuropsychiatric Genetics 2017 174:435-450 DOI:10.1002/ajmg.b.32533 PMID:28436151 PMCID:PMC5435561
- Peng, Q., Schork, A., Bartsch, H., Lo, M. T., Panizzon, M. S., Pediatric Imaging, Neurocognition and Genetics Study, Alzheimer’s Disease Neuroimaging Initiative, Westlye, L. T., Kremen, W. S., Jernigan, T. L., Le Hellard, S., Steen, V. M., et al. Conservation of distinct enetically-mediated human cortical pattern PLoS Genetics 2016 12 DOI:10.1371/journal.pgen.1006143 PMID:27459196 PMCID:PMC4961377
- Ehlers, C. L., Gizer, I. R., Bizon, C., Slutske, W., Peng, Q., Schork, N. J., Wilhelmsen, K. C. Single nucleotide polymorphisms in the REG-CTNNA2 region of chromosome 2 and NEIL3 associated with impulsivity in a Native American sample Genes Brain and Behavior 2016 15:568-577 DOI:10.1111/gbb.12297 PMID:27167163 PMCID:PMC4935619
- Chen, C. H., Schork, A. J., Lo, M. T., Fan, C. C., Wang, Y., Desikan, R. S., Bettella, F., Hagler, D. J., Pediatric Imaging, Neurocognition, Alzheimer's Disease Neuroimaging Initiative, Westlye, L. T., Kremen, W. S. Large-scale genomics unveil polygenic architecture of human cortical surface area Nature Communications 2015 6:7549 DOI:10.1038/ncomms8549 PMID:26189703 PMCID:PMC4518289
- Peng, Q., Schork, N. J. Utility of network integrity methods in therapeutic target identification Frontiers in Genetics 2014 5 DOI:10.3389/fgene.2014.00012 PMID:24550933 PMCID:PMC3909879
- Peng, Q., Gizer, I. R., Libiger, O., Bizon, C., Wilhelmsen, K. C., Schork, N. J., Ehlers, C. L. Association and ancestry analysis of sequence variants in ADH and ALDH using alcohol-related phenotypes in a Native American community sample American Journal of Medical Genetics Part B-Neuropsychiatric Genetics 2014 165:673-683 DOI:10.1002/ajmg.b.32272 PMID:25270064 PMCID:PMC4364382
- Peng, Q., Ecker, J. R. Detection of allele-specific methylation through a generalized heterogeneous epigenome model Bioinformatics 2012 28:I163-I171 DOI:10.1093/bioinformatics/bts231 PMID:22689757 PMCID:PMC3371863
- Peng, Q., Smith, A. D. Multiple sequence assembly from reads alignable to a common reference genome IEEE ACM Transactions on Computational Biology and Bioinformatics 2011 8:1283-1295 DOI:10.1109/tcbb.2010.107 PMID:21778524
- Chekanova, J. A., Gregory, B. D., Reverdatto, S. V., Chen, H., Kumar, R., Hooker, T., Yazaki, J., Li, P., Skiba, N., Peng, Q., Alonso, J., Brukhin, V., et al. Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome Cell 2007 131:1340-1353 DOI:10.1016/j.cell.2007.10.056 PMID:18160042
- Peng, Q., Pevzner, P. A., Tesler, G. The fragile breakage versus random breakage models of chromosome evolution PLoS Computational Biology 2006 2:100-111 DOI:10.1371/journal.pcbi.0020014 PMID:16501665 PMCID:PMC1378107
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chapter
- Peng, Q., Alekseyev, M. A., Tesler, G., Pevzner, P. A. Decoding synteny blocks and large-scale duplications in mammalian and plant genomes Algorithms in Bioinformatics. 220-232. 2009