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Kirchdoerfer, Robert
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Kirchdoerfer, Robert

Graduate Student
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Positions

  • 2019 - Faculty Member, University of Wisconsin-Madison
  • 2012 - 2018 Research Associate, Scripps Research

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Publications

recent publications
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  • academic article

    • Nogal, B., Bianchi, M., Cottrell, C. A., Kirchdoerfer, R. N., Sewall, L. M., Turner, H. L., Zhao, F., Sok, D., Burton, D. R., Hangartner, L., Ward, A. B. Mapping polyclonal antibody responses in non-human primates vaccinated with HIV env trimer subunit vaccines Cell Reports  2020 30:3755-3765  DOI:10.1016/j.celrep.2020.02.061  PMID:32187547  PMCID:PMC7153566
    • Wang, N., Rosen, O., Wang, L., Turner, H. L., Stevens, L. J., Corbett, K. S., Bowman, C. A., Pallesen, J., Shi, W., Zhang, Y., Leung, K., Kirchdoerfer, R. N., et al. Structural definition of a neutralization-sensitive epitope on the MERS-CoV S1-NTD Cell Reports  2019 28:3395-3405  DOI:10.1016/j.celrep.2019.08.052  PMID:31553909
    • Kirchdoerfer, R. N., Ward, A. B. Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors Nature Communications  2019 10  DOI:10.1038/s41467-019-10280-3  PMID:31138817  PMCID:PMC6538669
    • Kirchdoerfer, R. N., Saphire, E. O., Ward, A. B. Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex Acta Crystallographica Section F-Structural Biology Communications  2019 75:340-347  DOI:10.1107/s2053230x19004424  PMID:31045563  PMCID:PMC6497097
    • Kirchdoerfer, R. N., Wang, N., Pallesen, J., Wrapp, D., Turner, H. L., Cottrell, C. A., Corbett, K. S., Graham, B. S., McLellan, J. S., Ward, A. B. Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis Scientific Reports  2018 8  DOI:10.1038/s41598-018-34171-7  PMID:30356097  PMCID:PMC6200764
    • King, L. B., Fusco, M. L., Flyak, A. I., Ilinykh, P. A., Huang, K., Gunn, B., Kirchdoerfer, R. N., Hastie, K. M., Sangha, A. K., Meiler, J., Alter, G., Bukreyev, A., et al. The Marburgvirus-neutralizing human monoclonal antibody MR191 targets a conserved site to block virus receptor binding Cell Host & Microbe  2018 23:101-109  DOI:10.1016/j.chom.2017.12.003  PMID:29324225  PMCID:PMC5772738
    • Pallesen, J., Wang, N., Corbett, K. S., Wrapp, D., Kirchdoerfer, R. N., Turner, H. L., Cottrell, C. A., Becker, M. M., Wang, L., Shi, W., Kong, W. P., Andres, E. L., et al. Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen Proceedings of the National Academy of Sciences of the United States of America  2017 114:E7348-E7357  DOI:10.1073/pnas.1707304114  PMID:28807998
    • Bruhn, J. F., Kirchdoerfer, R. N., Urata, S. M., Li, S., Tickle, I. J., Bricogne, G., Saphire, E. O. Crystal structure of the Marburg virus VP35 oligomerization domain Journal of Virology  2017 91  DOI:10.1128/jvi.01085-16  PMID:27847355  PMCID:PMC5215338
    • Kirchdoerfer, R. N., Wasserman, H., Amarasinghe, G. K., Saphire, E. O. Filovirus structural biology: the molecules in the machine Current Topics in Microbiology and Immunology  2017 411:381-417  DOI:10.1007/82_2017_16  PMID:28795188
    • Kirchdoerfer, R. N., Moyer, C. L., Abelson, D. M., Saphire, E. O. The Ebola virus VP30-NP interaction Is a regulator of viral RNA synthesis PLoS Pathogens  2016 12  DOI:10.1371/journal.ppat.1005937  PMID:27755595  PMCID:PMC5068707
    • Kirchdoerfer, R. N.*, Cottrell, C. A.*, Wang, N., Pallesen, J., Yassine, H. M., Turner, H. L., Corbett, K. S., Graham, B. S., McLellan, J. S., Ward, A. B. Pre-fusion structure of a human coronavirus spike protein Nature  2016 531:118-121  DOI:10.1038/nature17200  PMID:26935699  PMCID:PMC4860016 (* = equal contribution)
    • Kirchdoerfer, R. N., Abelson, D. M., Li, S., Wood, M. R., Saphire, E. O. Assembly of the ebola virus nucleoprotein from a chaperoned VP35 complex Cell Reports  2015 12:140-149  DOI:10.1016/j.celrep.2015.06.003  PMID:26119732  PMCID:PMC4500542
    • Clifton, M. C., Kirchdoerfer, R. N., Atkins, K., Abendroth, J., Raymond, A., Grice, R., Barnes, S., Moen, S., Lorimer, D., Edwards, T. E., Myler, P. J., Saphire, E. O. Structure of the Reston ebolavirus VP30 C-terminal domain Acta Crystallographica Section F-Structural Biology Communications  2014 70:457-460  DOI:10.1107/s2053230x14003811  PMID:24699737  PMCID:PMC3976061
    • degree-related publication Lee, J. Y., Kim, H. S., Baek, I. W., Back, J. M., Han, M. R., Kong, S. Y., Kim, J. H., Kirchdoerfer, R. N., Kim, J. O., Cooper, M. D., Wilson, I. A., Kim, H. J., et al. Overexpression, crystallization and preliminary x-ray crystallographic analysis of the variable lymphocyte receptor 2913 ectodomain fused with internalin b Acta Crystallographica Section F-Structural Biology and Crystallization Communications  2013 69:39-41  DOI:10.1107/s1744309112045484  PMID:23295483  PMCID:PMC3539700
    • degree-related publication Moeller, A., Kirchdoerfer, R. N., Potter, C. S., Carragher, B., Wilson, I. A. Organization of the influenza virus replication machinery Science  2012 338:1631-1634  DOI:10.1126/science.1227270  PMID:23180774  PMCID:PMC3578580
    • degree-related publication Kirchdoerfer, R. N., Herrin, B. R., Han, B. W., Turnbough, C. L., Cooper, M. D., Wilson, I. A. Variable lymphocyte receptor recognition of the immunodominant glycoprotein of bacillus anthracis spores Structure  2012 20:479-486  DOI:10.1016/j.str.2012.01.009  PMID:22405006  PMCID:PMC3337218
    • degree-related publication Kirchdoerfer, R. N., Garner, A. L., Flack, C. E., Mee, J. M., Horswill, A. R., Janda, K. D., Kaufmann, G. F., Wilson, I. A. Structural basis for ligand recognition and discrimination of a quorum-quenching antibody Journal of Biological Chemistry  2011 286:17351-17358  DOI:10.1074/jbc.M111.231258  PMID:21454495  PMCID:PMC3089576
    • Ellis, J. P., Bakke, C. K., Kirchdoerfer, R. N., Jungbauer, L. M., Cavagnero, S. Chain dynamics of nascent polypeptides emerging from the ribosome ACS Chemical Biology  2008 3:555-566  DOI:10.1021/cb800059u  PMID:18717565  PMCID:PMC2572860
    • degree-related publication Debler, E. W., Kaufmann, G. F., Kirchdoerfer, R. N., Mee, J. M., Janda, K. D., Wilson, I. A. Crystal structures of a quorum-quenching antibody Journal of Molecular Biology  2007 368:1392-1402  DOI:10.1016/j.jmb.2007.02.081  PMID:17400249  PMCID:PMC1994716
    • Kirchdoerfer, R. N., Huang, J. J. T., Isola, M. K., Cavagnero, S. Fluorescence-based analysis of aminoacyl- and peptidyl-tRNA by low-pH sodium dodecyl sulfate-polyacrylamide gel electrophoresis Analytical Biochemistry  2007 364:92-94  DOI:10.1016/j.ab.2007.01.019  PMID:17368419  PMCID:PMC2693959
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Background

education and training

  • Ph.D. in Molecular Biophysics, Scripps Research 2006 - 2012
  • B.S. in Genetics and Biochemistry, University of Wisconsin-Madison 2002 - 2006

awards and honors

  • K99 Pathway to Indpendence Award, conferred by National Institutes of Health, 2017

advisee of

  • graduate advising relationship

    • Wilson, Ian, Ph.D.  candidacy, 2007 - 2012
  • postdoc or fellow advising relationship

    • Ward, Andrew, Ph.D.  candidacy, 2015 - 2019
    • Saphire, Erica Ollmann, Ph.D.  candidacy, 2012 - 2016
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Contact

full name

  • Robert Nicholas Kirchdoerfer

geographic location

  • Scripps California 
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Identity

ORCID iD

  • ORCID iD http://orcid.org/0000-0002-5974-2709

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