recent publications
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academic article
- Nogal, B., McCoy, L. E., van Gils, M. J., Cottrell, C. A., Voss, J. E., Andrabi, R., Pauthner, M., Liang, C. H., Messmer, T., Nedellec, R., Shin, M., Turner, H. L., et al. HIV envelope trimer-elicited autologous neutralizing antibodies bind a region overlapping the N332 glycan supersite Science Advances 2020 6 DOI:10.1126/sciadv.aba0512 PMID:32548265 PMCID:PMC7274786
- Yang, Y. H. R., McCoy, L. E., van Gils, M. J., Andrabi, R., Turner, H. L., Yuan, M., Cottrell, C. A., Ozorowski, G., Voss, J., Pauthner, M., Polveroni, T. M., Messmer, T., et al. Autologous antibody responses to an HIV envelope glycan hole are not easily broadened in rabbits Journal of Virology 2020 94 DOI:10.1128/jvi.01861-19 PMID:31941772 PMCID:PMC7081899
- Pedreno-Lopez, N., Dang, C. M., Rosen, B. C., Ricciardi, M. J., Bailey, V. K., Gutman, M. J., Gonzalez-Nieto, L., Pauthner, M. G., Le, K., Song, G., Andrabi, R., Weisgrau, K. L., et al. Induction of transient virus replication facilitates antigen-independent isolation of SIV-specific monoclonal antibodies Molecular Therapy-Methods & Clinical Development 2020 16:225-237 DOI:10.1016/j.omtm.2020.01.010 PMID:32083148 PMCID:PMC7021589
- Pedreno-Lopez, N., Ricciardi, M. J., Rosen, B. C., Song, G., Andrabi, R., Burton, D. R., Rakasz, E. G., Watkins, D. I. An Automated Fluorescence-Based Method to Isolate Bone Marrow-Derived Plasma Cells from Rhesus Macaques Using SIVmac239 SOSIP.664 Molecular Therapy-Methods & Clinical Development 2020 18:781-790 DOI:10.1016/j.omtm.2020.08.004 PMID:32953929 PMCID:PMC7476808
- Rogers, T. F., Zhao, F., Huang, D. L., Beutler, N., Burns, A., He, W. T., Limbo, O., Smith, C., Song, G., Woehl, J., Yang, L. L., Abbott, R. K., et al. Isolation of potent SARS-CoV-2 neutralizing antibodies and protection from disease in a small animal model Science 2020 369:956-963 DOI:10.1126/science.abc7520 PMID:32540903 PMCID:PMC7299280
- von Bredow, B., Andrabi, R., Grunst, M., Grandea, A. G., Le, K., Song, G., Berndsen, Z. T., Porter, K., Pallesen, J., Ward, A. B., Burton, D. R., Evans, D. T. Differences in the binding affinity of an HIV-1 V2 apex-specific antibody for the SIVsmm/mac envelope glycoprotein uncouple antibody-dependent cellular cytotoxicity from neutralization Mbio 2019 10:e01255-19 DOI:10.1128/mBio.01255-19 PMID:31266872 PMCID:PMC6606807
- Andrabi, R., Pallesen, J., Allen, J. D., Song, G., Zhang, J., de Val, N., Gegg, G., Porter, K., Su, C., Pauthner, M., Newman, A., Bouton-Verville, H., et al. The chimpanzee SIV envelope trimer: structure and deployment as an HIV vaccine template Cell Reports 2019 27:2426-2441 DOI:10.1016/j.celrep.2019.04.082 PMID:31116986 PMCID:PMC6533203
- Voss, J. E., Gonzalez-Martin, A., Andrabi, R., Fuller, R. P., Murrell, B., McCoy, L. E., Porter, K., Huang, D., Li, W., Sok, D., Le, K., Briney, B., et al. Reprogramming the antigen specificity of B cells using genome-editing technologies Elife 2019 8 DOI:10.7554/eLife.42995 PMID:30648968 PMCID:PMC6355199
- Cao, L. W., Pauthner, M., Andrabi, R., Rantalainen, K., Berndsen, Z., Diedrich, J. K., Menis, S., Sok, D., Bastidas, R., Park, S. K. R., Delahunty, C. M., He, L., et al. Differential processing of HIV envelope glycans on the virus and soluble recombinant trimer Nature Communications 2018 9 DOI:10.1038/s41467-018-06121-4 PMID:30209313 PMCID:PMC6135743
- Andrabi, R., Bhiman, J. N., Burton, D. R. Strategies for a multi-stage neutralizing antibody-based HIV vaccine Current Opinion in Immunology 2018 53:143-151 DOI:10.1016/j.coi.2018.04.025 PMID:29775847 PMCID:PMC6141341
- Voss, J. E., Andrabi, R., McCoy, L. E., de Val, N., Fuller, R. P., Messmer, T., Su, C. Y., Sok, D., Khan, S. N., Garces, F., Pritchard, L. K., Wyatt, R. T., et al. Elicitation of neutralizing antibodies targeting the V2 apex of the HIV Envelope trimer in a wild-type animal model Cell Reports 2017 21:222-235 DOI:10.1016/j.celrep.2017.09.024 PMID:28978475 PMCID:PMC5640805
- Lee, J. H., Andrabi, R., Su, C. Y., Yasmeen, A., Julien, J. P., Kong, L., Wu, N. C., McBride, R., Sok, D., Pauthner, M., Cottrell, C. A., Nieusma, T., et al. A broadly neutralizing antibody targets the dynamic HIV envelope trimer apex via a long, rigidified, and anionic β-hairpin structure Immunity 2017 46:690-702 DOI:10.1016/j.immuni.2017.03.017 PMID:28423342 PMCID:PMC5400778
- Cao, L., Diedrich, J. K., Kulp, D. W., Pauthner, M., He, L., Park, S. K. R., Sok, D., Su, C. Y., Delahunty, C. M., Menis, S., Andrabi, R., Guenaga, J., et al. Global site-specific N-glycosylation analysis of HIV envelope glycoprotein Nature Communications 2017 8 DOI:10.1038/ncomms14954 PMID:28348411
- Andrabi, R., Su, C. Y., Liang, C. H., Shivatare, S. S., Briney, B., Voss, J. E., Nawazi, S. K., Wu, C. Y., Wong, C. H., Burton, D. R. Glycans function as anchors for antibodies and help drive HIV broadly neutralizing antibody development Immunity 2017 47:524-537 DOI:10.1016/j.immuni.2017.08.006 PMID:28916265 PMCID:PMC5613947
- Voss, J. E., Macauley, M. S., Rogers, K. A., Villinger, F., Duan, L., Shang, L., Fink, E. A., Andrabi, R., Colantonio, A. D., Robinson, J. E., Johnson, R. P., Burton, D. R., et al. Reproducing SIVΔnef vaccine correlates of protection: trimeric gp41 antibody concentrated at mucosal front lines AIDS 2016 30:2427-2438 DOI:10.1097/qad.0000000000001199 PMID:27428745 PMCID:PMC5069161
- Andrabi, R., Voss, J. E., Liang, C. H., Briney, B., McCoy, L. E., Wu, C. Y., Wong, C. H., Poignard, P., Burton, D. R. Identification of common features in prototype broadly neutralizing antibodies to HIV envelope V2 apex to facilitate vaccine design Immunity 2015 43:959-973 DOI:10.1016/j.immuni.2015.10.014 PMID:26588781 PMCID:PMC4654981
- Khan, L., Makhdoomi, M. A., Kumar, S., Nair, A., Andrabi, R., Clark, B. E., Auyeung, K., Bhattacharya, J., Vajpayee, M., Wig, N., Pantophlet, R., Luthra, K. Identification of CD4-binding site dependent plasma neutralizing antibodies in an HIV-1 Infected Indian individual PLoS One 2015 10 DOI:10.1371/journal.pone.0125575 PMID:25962059 PMCID:PMC4427266
- Andrabi, R., Makhdoomi, M. A., Kumar, R., Bala, M., Parray, H., Gupta, A., Kotnala, A., Thirumurthy, V., Luthra, K. Highly efficient neutralization by plasma antibodies from human immunodeficiency virus type-1 infected individuals on antiretroviral drug therapy Journal of Clinical Immunology 2014 34:504-513 DOI:10.1007/s10875-014-0010-y PMID:24682667
- Singh, A., Palanichamy, J. K., Ramalingam, P., Kassab, M. A., Bhagat, M., Andrabi, R., Luthra, K., Sinha, S., Chattopadhyay, P. Long-term suppression of HIV-1C virus production in human peripheral blood mononuclear cells by LTR heterochromatization with a short double-stranded RNA Journal of Antimicrobial Chemotherapy 2014 69:404-415 DOI:10.1093/jac/dkt348 PMID:24022068
- Almagro, J. C., Gilliland, G. L., Breden, F., Scott, J. K., Sok, D., Pauthner, M., Reichert, J. M., Helguera, G., Andrabi, R., Mabry, R., Blery, M., Voss, J. E., et al. Antibody engineering and therapeutics, The Annual Meeting of the Antibody Society: December 8-12, 2013, Huntington Beach, CA MAbs 2014 6:577-618 DOI:10.4161/mabs.28421 PMID:24589717 PMCID:PMC4011904
- Andrabi, R., Williams, C., Wang, X. H., Li, L., Choudhary, A. K., Wig, N., Biswas, A., Luthra, K., Nadas, A., Seaman, M. S., Nyambi, P., Zolla-Pazner, S., et al. Cross-neutralizing activity of human anti-V3 monoclonal antibodies derived from non-B clade HIV-1 infected individuals Virology 2013 439:81-88 DOI:10.1016/j.virol.2012.12.010 PMID:23466102 PMCID:PMC3756680
- Kumar, R., Andrabi, R., Tiwari, A., Prakash, S. S., Wig, N., Dutta, D., Sankhyan, A., Khan, L., Sinha, S., Luthra, K. A novel strategy for efficient production of anti-V3 human scFvs against HIV-1 clade C BMC Biotechnology 2012 12 DOI:10.1186/1472-6750-12-87 PMID:23153214 PMCID:PMC3536577
- Andrabi, R., Kumar, R., Bala, M., Nair, A., Prakash, S. S., Kushwaha, V., Luthra, K. Envelope diversity, characteristics of V3 region and predicted co-receptor usage of human immunodeficiency viruses infecting north Indians Journal of Microbiology 2012 50:869-873 DOI:10.1007/s12275-012-2136-z PMID:23124759
- Andrabi, R., Kumar, R., Bala, M., Nair, A., Biswas, A., Wig, N., Kumar, P., Pal, R., Sinha, S., Luthra, K. Production and characterization of human anti-V3 monoclonal antibodies from the cells of HIV-1 infected Indian donors Virology Journal 2012 9 DOI:10.1186/1743-422x-9-196 PMID:22971578 PMCID:PMC3493341
- Prakash, S. S., Andrabi, R., Kumar, R., Lodha, R., Kabra, S. K., Vajpayee, M., Luthra, K. Antibodies that cross-neutralize the tier-2 pseudoviruses are produced in antiretroviral-naive HIV-1-infected children from northern India Archives of Virology 2012 157:1797-1801 DOI:10.1007/s00705-012-1357-0 PMID:22674340
- Andrabi, R., Bala, M., Kumar, R., Wig, N., Hazarika, A., Luthra, K. Neutralization of tier-2 viruses and epitope profiling of plasma antibodies from human immunodeficiency virus type 1 infected donors from India PLoS One 2012 7 DOI:10.1371/journal.pone.0043704 PMID:22952740 PMCID:PMC3432049
- Choudhary, A. K., Andrabi, R., Prakash, S. S., Kumar, R., Choudhury, S. D., Wig, N., Biswas, A., Hazarika, A., Luthra, K. Neutralization potential of the plasma of HIV-1 infected Indian patients in the context of Anti-V3 antibody content and antiretroviral theraphy Journal of Microbiology 2012 50:149-154 DOI:10.1007/s12275-012-1246-y PMID:22367950
- Prakash, S. S., Andrabi, R., Kumar, R., Kabra, S. K., Lodha, R., Vajpayee, M., Luthra, K. Binding antibody responses to the immunogenic regions of viral envelope in HIV-1-infected Indian children Viral Immunology 2011 24:463-469 DOI:10.1089/vim.2011.0039 PMID:22149971 PMCID:PMC3234704
- Andrabi, R., Choudhary, A. K., Bala, M., Kalra, R., Prakash, S. S., Pandey, R. M., Luthra, K. Relative reactivity of HIV-1 polyclonal plasma antibodies directed to V3 and MPER regions suggests immunodominance of V3 over MPER and dependence of high anti-V3 antibody titers on virus persistence Archives of Virology 2011 156:1787-1794 DOI:10.1007/s00705-011-1053-5 PMID:21735212
- Choudhury, S. D., Chaudhury, A. K., Kalra, R., Andrabi, R., Wig, N., Biswas, A., Bala, M., Luthra, K. Antiretroviral drug resistance mutations in the reverse transcriptase gene of HIV-1 isolates from Northern Indian patients: a follow-up study Archives of Virology 2010 155:563-569 DOI:10.1007/s00705-010-0605-4 PMID:20180140
- Rehman, S., Shawl, A. S., Kour, A., Andrabi, R., Sudan, P., Sultan, P., Verma, V., Qazi, G. N. An endophytic Neurospora sp. from Nothapodytes foetida producing camptothecin Applied Biochemistry and Microbiology 2008 44:203-209 DOI:10.1134/s0003683808020130 PMID:18669267